CST BLOG: Lab Expectations

The official blog of Cell Signaling Technology (CST) where we discuss what to expect from your time at the bench, share tips, tricks, and information.

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Have you been wondering how to monitor a cell state or cellular response? From a basic research standpoint, signaling pathways are so intertwined that cell readouts are a must-have to fully understand the consequences when, for example, a specific protein is modified or an epigenetic event occurs. In today’s publishing world, it’s not enough to know that a protein gets phosphorylated when exposed to a known stimulus; you must also know the effect that phosphorylation event has on the behavior of a cell population. From a translational medicine standpoint, knowing how a cell population responds to a potential treatment is critical. This can include, but is not limited to, looking for apoptosis for neurodegenerative diseases, senescence for oncological diseases, and immune responses against viral infections.

Cell states can be monitored by measuring key markers or readouts that correlate to your process of interest. A particular process can have several readouts that can be used with different methodologies. This gives you the ability to measure multiple key markers to guard against false positives and gives you the flexibility to select the marker, application, and detection method that will work best for your experiment.

 

For example, there are multiple ways to monitor apoptosis by targeting different hallmarks of cell death and signaling pathways. Terminal deoxynucleotidyl transferase dUTP nick end labeling (TUNEL) is a stain that detects fragmented DNA observed in late-stage apoptosis. It is widely used to detect apoptotic cells using flow cytometry, immunohistochemistry, or fluorescent microscopy. Similarly, Annexin V binding to phosphatidylserine (PS) is often used with flow cytometry to monitor early-stage apoptosis when PS flips within the plasma membrane and appears on the cell surface. Finally, caspase-3 activation can be used with western blots, immunohistochemistry, or fluorescent microscopy to monitor caspase-induced apoptosis.

 

Senescence can also be monitored in several different ways. One common approach is an assay that measures increased activity of β-galactosidase, a hallmark of senescence. Enzyme activity can be quantitatively measured with fluorescence using flow cytometry or a plate-based assay, or imaged using a staining kit. Cell senescence can also be monitored by detecting the expression senescence markers like p16 INK4A, p21 Waf1/Cip1, and Lamin B1 using western blotting, immunoprecipitation, immunohistochemistry, immunofluorescence, or flow cytometry.

 

Cell Signaling Technology® has a variety of cellular assay kits and antibody sampler kits that target key markers to help you get started.

 

Cell State Kit
Proliferation 

BrdU Cell Proliferation Assay Kit #6813

BrdU Proliferation Chemiluminescent Assay Kit #5492

Cell Proliferation Tracer Kit (Fluorometric, Blue 520) #53452

Cell Proliferation Tracer Kit (Fluorometric, Violet 450) #48444

Microglia Proliferation Module Antibody Sampler Kit #49938

Proliferation/Apoptosis  SignalStain® Proliferation/Apoptosis IHC Sampler Kit #8109
Viability

XTT Cell Viability Kit #9095

Resazurin Cell Viability Kit #11884

Tau Mouse Model Neuronal Viability IF Antibody Sampler Kit #56511

β-Amyloid Mouse Model Neuronal Viability IF Antibody Sampler Kit #41608

Apoptosis

SignalStain® Apoptosis (Cleaved Caspase-3) Detection Kit #12692

Caspase-3 Activity Assay Kit #5723

Annexin V-FITC Early Apoptosis Detection Kit #6592

Annexin V-PE Early Apoptosis Detection Kit #40295

Apoptosis/Necroptosis Antibody Sampler Kit #92570

Apoptosis Antibody Sampler Kit #9915

Apoptosis Antibody Sampler Kit (Mouse Preferred) #9930

Pro-Apoptosis Bcl-2 Family Antibody Sampler Kit #9942

Pro-Apoptosis Bcl-2 Family Antibody Sampler Kit II #98322

Stress and Apoptosis Antibody Sampler Kit #8357

Oxidative State

Cellular Glutathione Detection Assay Kit #13859

Griess Reagent Nitrite Measurement Kit #13547

Cytotoxicity

LDH Cytotoxicity Assay Kit #37291

7-AAD/CFSE Cell-Mediated Cytotoxicity Assay Kit #72782

Senescence

Senescence β-Galactosidase Activity Assay Kit
(Fluorescence, Flow Cytometry) #35302

 Senescence β-Galactosidase Activity Assay Kit
(Fluorescence, Plate-Based) #23833

 Senescence β-Galactosidase Staining Kit #9860

 Senescence Marker Antibody Sampler Kit #56062

 Senescence Associated Secretory Phenotype (SASP)

Antibody Sampler Kit #38461

 Mouse Reactive Senescence Associated Secretory Phenotype (SASP)
Antibody  Sampler Kit #85741

 

 

 

Andrea Tu, PhD
Andrea Tu, PhD
Andrea Tu, PhD, is a Scientific Marketing Manager at Kallidus Group who geeks out when learning about the latest scientific trends and developments. She received a PhD in Molecular and Cell Biology from the University of California, Berkeley where she studied Smad post-translational modifications in the TGF-β signaling pathway. Over the course of 20 years, Andrea has worked at UC San Diego, the Salk Institute, Stanford, Agilent Technologies, and Bio-Techne in technical roles spanning R&D, sales support, and marketing.

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